Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC9A3P48764 TSPY17P-201ENST00000450329 467 ntBASIC16.64■□□□□ 0.25
SLC9A3P48764 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC9A3P48764 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.64■□□□□ 0.25
SLC9A3P48764 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC9A3P48764 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC9A3P48764 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SLC9A3P48764 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC9A3P48764 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SLC9A3P48764 AC008894.3-201ENST00000624324 3103 ntBASIC16.64■□□□□ 0.25
SLC9A3P48764 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC9A3P48764 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC9A3P48764 FLJ13224-201ENST00000313737 1514 ntBASIC16.64■□□□□ 0.25
SLC9A3P48764 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.64■□□□□ 0.25
SLC9A3P48764 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC9A3P48764 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC9A3P48764 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC9A3P48764 AC036111.1-201ENST00000533973 1582 ntBASIC16.64■□□□□ 0.25
SLC9A3P48764 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC9A3P48764 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC9A3P48764 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SLC9A3P48764 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC9A3P48764 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC9A3P48764 MIR149-201ENST00000384879 89 ntBASIC16.63■□□□□ 0.25
SLC9A3P48764 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC9A3P48764 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC9A3P48764 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC9A3P48764 AL163051.1-201ENST00000569214 1512 ntBASIC16.63■□□□□ 0.25
SLC9A3P48764 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC9A3P48764 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC9A3P48764 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 AC124067.4-201ENST00000519691 2379 ntBASIC16.63■□□□□ 0.25
SLC9A3P48764 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC9A3P48764 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SLC9A3P48764 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC9A3P48764 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC9A3P48764 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC9A3P48764 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC9A3P48764 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 AC009102.3-201ENST00000623118 1491 ntBASIC16.62■□□□□ 0.25
SLC9A3P48764 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 UNC93B2-201ENST00000285383 730 ntBASIC16.62■□□□□ 0.25
SLC9A3P48764 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC9A3P48764 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC9A3P48764 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC9A3P48764 AC009065.1-201ENST00000564055 1225 ntBASIC16.62■□□□□ 0.25
SLC9A3P48764 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC9A3P48764 MIR4674-201ENST00000582457 87 ntBASIC16.62■□□□□ 0.25
SLC9A3P48764 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC9A3P48764 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC9A3P48764 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC9A3P48764 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC9A3P48764 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms