Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.29■□□□□ 0.68
SSR1P43307 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.29■□□□□ 0.68
SSR1P43307 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.29■□□□□ 0.68
SSR1P43307 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SSR1P43307 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.29■□□□□ 0.68
SSR1P43307 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SSR1P43307 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.29■□□□□ 0.68
SSR1P43307 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.29■□□□□ 0.68
SSR1P43307 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SSR1P43307 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SSR1P43307 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.29■□□□□ 0.68
SSR1P43307 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSR1P43307 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.28■□□□□ 0.68
SSR1P43307 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SSR1P43307 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.28■□□□□ 0.68
SSR1P43307 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SSR1P43307 AC092338.2-201ENST00000568827 1415 ntBASIC19.28■□□□□ 0.68
SSR1P43307 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
SSR1P43307 AC007663.1-201ENST00000438948 1240 ntBASIC19.28■□□□□ 0.68
SSR1P43307 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.28■□□□□ 0.68
SSR1P43307 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.28■□□□□ 0.68
SSR1P43307 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SSR1P43307 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.28■□□□□ 0.68
SSR1P43307 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SSR1P43307 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSR1P43307 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SSR1P43307 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSR1P43307 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 AC068880.1-201ENST00000507289 2297 ntBASIC19.27■□□□□ 0.68
SSR1P43307 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.27■□□□□ 0.68
SSR1P43307 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.27■□□□□ 0.68
SSR1P43307 AL163051.1-201ENST00000569214 1512 ntBASIC19.27■□□□□ 0.68
SSR1P43307 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.27■□□□□ 0.68
SSR1P43307 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SSR1P43307 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.27■□□□□ 0.68
SSR1P43307 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.27■□□□□ 0.68
SSR1P43307 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.27■□□□□ 0.68
SSR1P43307 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.27■□□□□ 0.68
SSR1P43307 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSR1P43307 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSR1P43307 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSR1P43307 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SSR1P43307 NOC2LP2-201ENST00000407594 1944 ntBASIC19.27■□□□□ 0.67
SSR1P43307 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SSR1P43307 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.27■□□□□ 0.67
SSR1P43307 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SSR1P43307 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.26■□□□□ 0.67
SSR1P43307 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SSR1P43307 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.26■□□□□ 0.67
SSR1P43307 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
SSR1P43307 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SSR1P43307 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SSR1P43307 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.26■□□□□ 0.67
SSR1P43307 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSR1P43307 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms