Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.34■□□□□ 0.53
RPA3P35244 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPA3P35244 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.34■□□□□ 0.53
RPA3P35244 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.34■□□□□ 0.53
RPA3P35244 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.34■□□□□ 0.53
RPA3P35244 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPA3P35244 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPA3P35244 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RPA3P35244 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.34■□□□□ 0.53
RPA3P35244 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.34■□□□□ 0.53
RPA3P35244 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPA3P35244 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPA3P35244 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPA3P35244 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPA3P35244 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.34■□□□□ 0.53
RPA3P35244 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
RPA3P35244 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPA3P35244 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPA3P35244 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPA3P35244 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RPA3P35244 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.33■□□□□ 0.53
RPA3P35244 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
RPA3P35244 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RPA3P35244 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.33■□□□□ 0.53
RPA3P35244 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPA3P35244 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 BX088651.1-201ENST00000540551 451 ntBASIC18.33■□□□□ 0.52
RPA3P35244 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.33■□□□□ 0.52
RPA3P35244 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.33■□□□□ 0.52
RPA3P35244 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.33■□□□□ 0.52
RPA3P35244 AC124067.4-201ENST00000519691 2379 ntBASIC18.33■□□□□ 0.52
RPA3P35244 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
RPA3P35244 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPA3P35244 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.33■□□□□ 0.52
RPA3P35244 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPA3P35244 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPA3P35244 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RPA3P35244 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 AL109659.2-201ENST00000606809 1674 ntBASIC18.32■□□□□ 0.52
RPA3P35244 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RPA3P35244 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.32■□□□□ 0.52
RPA3P35244 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.32■□□□□ 0.52
RPA3P35244 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.32■□□□□ 0.52
RPA3P35244 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.32■□□□□ 0.52
RPA3P35244 C2orf69P3-201ENST00000565542 1120 ntBASIC18.32■□□□□ 0.52
RPA3P35244 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.32■□□□□ 0.52
RPA3P35244 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.32■□□□□ 0.52
RPA3P35244 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RPA3P35244 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPA3P35244 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPA3P35244 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.32■□□□□ 0.52
RPA3P35244 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RPA3P35244 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPA3P35244 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPA3P35244 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms