Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.42■□□□□ 0.22
GDF1P27539 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.42■□□□□ 0.22
GDF1P27539 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
GDF1P27539 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GDF1P27539 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.42■□□□□ 0.22
GDF1P27539 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.42■□□□□ 0.22
GDF1P27539 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.42■□□□□ 0.22
GDF1P27539 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GDF1P27539 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.41■□□□□ 0.22
GDF1P27539 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.41■□□□□ 0.22
GDF1P27539 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.41■□□□□ 0.22
GDF1P27539 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GDF1P27539 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GDF1P27539 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.41■□□□□ 0.22
GDF1P27539 KRT17P6-201ENST00000453795 1220 ntBASIC16.41■□□□□ 0.22
GDF1P27539 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.41■□□□□ 0.22
GDF1P27539 AC138894.3-201ENST00000603787 634 ntBASIC16.41■□□□□ 0.22
GDF1P27539 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.41■□□□□ 0.22
GDF1P27539 AL691432.3-201ENST00000621860 400 ntBASIC16.41■□□□□ 0.22
GDF1P27539 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GDF1P27539 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GDF1P27539 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GDF1P27539 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.4■□□□□ 0.22
GDF1P27539 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.4■□□□□ 0.22
GDF1P27539 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
GDF1P27539 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.4■□□□□ 0.22
GDF1P27539 NUS1P1-201ENST00000446295 882 ntBASIC16.4■□□□□ 0.22
GDF1P27539 MINOS1P3-201ENST00000457048 203 ntBASIC16.4■□□□□ 0.22
GDF1P27539 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.4■□□□□ 0.22
GDF1P27539 FOSL1P1-201ENST00000511041 816 ntBASIC16.4■□□□□ 0.22
GDF1P27539 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.4■□□□□ 0.22
GDF1P27539 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.4■□□□□ 0.22
GDF1P27539 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.4■□□□□ 0.22
GDF1P27539 AC099336.1-202ENST00000602961 463 ntBASIC16.4■□□□□ 0.22
GDF1P27539 AC009154.2-201ENST00000621177 724 ntBASIC16.4■□□□□ 0.22
GDF1P27539 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GDF1P27539 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.4■□□□□ 0.22
GDF1P27539 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.4■□□□□ 0.22
GDF1P27539 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.4■□□□□ 0.22
GDF1P27539 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GDF1P27539 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
GDF1P27539 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
GDF1P27539 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.39■□□□□ 0.21
GDF1P27539 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GDF1P27539 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GDF1P27539 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.39■□□□□ 0.21
GDF1P27539 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDF1P27539 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
GDF1P27539 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.39■□□□□ 0.21
GDF1P27539 AC246785.2-201ENST00000432512 513 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms