Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.82■□□□□ 0.44
VARSP26640 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
VARSP26640 AP000593.1-201ENST00000393668 712 ntBASIC17.82■□□□□ 0.44
VARSP26640 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.82■□□□□ 0.44
VARSP26640 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.82■□□□□ 0.44
VARSP26640 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.82■□□□□ 0.44
VARSP26640 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VARSP26640 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VARSP26640 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VARSP26640 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.82■□□□□ 0.44
VARSP26640 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.82■□□□□ 0.44
VARSP26640 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 HOXB1-202ENST00000577092 1414 ntBASIC17.81■□□□□ 0.44
VARSP26640 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 AC135776.1-201ENST00000319817 2481 ntBASIC17.81■□□□□ 0.44
VARSP26640 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 AC141586.5-201ENST00000624546 2050 ntBASIC17.81■□□□□ 0.44
VARSP26640 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.81■□□□□ 0.44
VARSP26640 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VARSP26640 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.81■□□□□ 0.44
VARSP26640 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.81■□□□□ 0.44
VARSP26640 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.81■□□□□ 0.44
VARSP26640 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 AC112497.1-201ENST00000624824 639 ntBASIC17.81■□□□□ 0.44
VARSP26640 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.81■□□□□ 0.44
VARSP26640 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.81■□□□□ 0.44
VARSP26640 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.81■□□□□ 0.44
VARSP26640 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 AC008764.6-201ENST00000595909 2069 ntBASIC17.81■□□□□ 0.44
VARSP26640 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.81■□□□□ 0.44
VARSP26640 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VARSP26640 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VARSP26640 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
VARSP26640 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.8■□□□□ 0.44
VARSP26640 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VARSP26640 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
VARSP26640 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.8■□□□□ 0.44
VARSP26640 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 AC092647.4-201ENST00000457211 535 ntBASIC17.8■□□□□ 0.44
VARSP26640 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.8■□□□□ 0.44
VARSP26640 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.8■□□□□ 0.44
VARSP26640 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.8■□□□□ 0.44
VARSP26640 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VARSP26640 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.8■□□□□ 0.44
VARSP26640 AL358472.4-201ENST00000633140 710 ntBASIC17.8■□□□□ 0.44
VARSP26640 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms