Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CHMP24386 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP24386 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CHMP24386 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP24386 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CHMP24386 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CHMP24386 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CHMP24386 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP24386 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP24386 AC008556.1-201ENST00000610908 2040 ntBASIC16.96■□□□□ 0.31
CHMP24386 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP24386 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHMP24386 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP24386 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.96■□□□□ 0.31
CHMP24386 MIR3180-5-201ENST00000583743 153 ntBASIC16.96■□□□□ 0.31
CHMP24386 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP24386 AC006011.2-201ENST00000621313 1158 ntBASIC16.96■□□□□ 0.31
CHMP24386 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP24386 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP24386 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP24386 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP24386 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP24386 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.96■□□□□ 0.3
CHMP24386 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP24386 REXO1L9P-201ENST00000604264 2108 ntBASIC16.96■□□□□ 0.3
CHMP24386 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP24386 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.96■□□□□ 0.3
CHMP24386 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CHMP24386 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP24386 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 BCL2-203ENST00000589955 5011 ntBASIC16.95■□□□□ 0.3
CHMP24386 AL109659.2-201ENST00000606809 1674 ntBASIC16.95■□□□□ 0.3
CHMP24386 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 AK4P3-201ENST00000418260 669 ntBASIC16.95■□□□□ 0.3
CHMP24386 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHMP24386 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP24386 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP24386 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CHMP24386 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP24386 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP24386 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP24386 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP24386 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP24386 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.94■□□□□ 0.3
CHMP24386 RNF152P1-201ENST00000397754 604 ntBASIC16.94■□□□□ 0.3
CHMP24386 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP24386 AC117947.1-201ENST00000427448 529 ntBASIC16.94■□□□□ 0.3
CHMP24386 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP24386 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.94■□□□□ 0.3
CHMP24386 AC009947.2-201ENST00000444014 672 ntBASIC16.94■□□□□ 0.3
CHMP24386 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP24386 YBX1P2-201ENST00000489612 999 ntBASIC16.94■□□□□ 0.3
CHMP24386 AC140113.3-201ENST00000605663 199 ntBASIC16.94■□□□□ 0.3
CHMP24386 AC139887.4-201ENST00000607877 719 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms