Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.28■□□□□ 0.52
CCND1P24385 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.28■□□□□ 0.52
CCND1P24385 FITM1-202ENST00000559294 800 ntBASIC18.28■□□□□ 0.52
CCND1P24385 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.28■□□□□ 0.52
CCND1P24385 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCND1P24385 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCND1P24385 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCND1P24385 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CCND1P24385 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCND1P24385 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCND1P24385 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCND1P24385 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCND1P24385 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCND1P24385 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCND1P24385 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCND1P24385 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CCND1P24385 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CCND1P24385 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCND1P24385 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCND1P24385 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.27■□□□□ 0.52
CCND1P24385 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCND1P24385 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.27■□□□□ 0.52
CCND1P24385 AL355075.4-201ENST00000554988 638 ntBASIC18.27■□□□□ 0.52
CCND1P24385 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
CCND1P24385 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.27■□□□□ 0.52
CCND1P24385 AC011676.5-201ENST00000624864 2660 ntBASIC18.27■□□□□ 0.52
CCND1P24385 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCND1P24385 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
CCND1P24385 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCND1P24385 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCND1P24385 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCND1P24385 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCND1P24385 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCND1P24385 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCND1P24385 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.27■□□□□ 0.51
CCND1P24385 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCND1P24385 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCND1P24385 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.27■□□□□ 0.51
CCND1P24385 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.27■□□□□ 0.51
CCND1P24385 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
CCND1P24385 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.26■□□□□ 0.51
CCND1P24385 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.26■□□□□ 0.51
CCND1P24385 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCND1P24385 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCND1P24385 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.26■□□□□ 0.51
CCND1P24385 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.26■□□□□ 0.51
CCND1P24385 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.26■□□□□ 0.51
CCND1P24385 SLC25A1P2-201ENST00000430693 912 ntBASIC18.26■□□□□ 0.51
CCND1P24385 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.26■□□□□ 0.51
CCND1P24385 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.26■□□□□ 0.51
CCND1P24385 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCND1P24385 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.26■□□□□ 0.51
CCND1P24385 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.26■□□□□ 0.51
CCND1P24385 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCND1P24385 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCND1P24385 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.25■□□□□ 0.51
CCND1P24385 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
CCND1P24385 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.25■□□□□ 0.51
CCND1P24385 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.25■□□□□ 0.51
CCND1P24385 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCND1P24385 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.25■□□□□ 0.51
CCND1P24385 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.25■□□□□ 0.51
CCND1P24385 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.25■□□□□ 0.51
CCND1P24385 AP000525.1-201ENST00000608286 694 ntBASIC18.25■□□□□ 0.51
CCND1P24385 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCND1P24385 KRT8P32-201ENST00000512863 1461 ntBASIC18.25■□□□□ 0.51
CCND1P24385 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.25■□□□□ 0.51
CCND1P24385 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCND1P24385 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCND1P24385 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms