Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.1■■□□□ 1.13
KCNA3P22001 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
KCNA3P22001 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
KCNA3P22001 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
KCNA3P22001 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KCNA3P22001 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
KCNA3P22001 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 PAWRP1-201ENST00000451083 565 ntBASIC22.09■■□□□ 1.13
KCNA3P22001 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 MIR4751-201ENST00000578027 74 ntBASIC22.09■■□□□ 1.13
KCNA3P22001 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 AC004790.2-201ENST00000623588 572 ntBASIC22.09■■□□□ 1.13
KCNA3P22001 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.09■■□□□ 1.13
KCNA3P22001 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
KCNA3P22001 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.09■■□□□ 1.13
KCNA3P22001 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
KCNA3P22001 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.09■■□□□ 1.13
KCNA3P22001 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 AC010460.3-201ENST00000511359 1579 ntBASIC22.08■■□□□ 1.13
KCNA3P22001 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 PKD1P6-201ENST00000343738 4769 ntBASIC22.08■■□□□ 1.13
KCNA3P22001 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
KCNA3P22001 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.08■■□□□ 1.13
KCNA3P22001 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.08■■□□□ 1.13
KCNA3P22001 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
KCNA3P22001 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.08■■□□□ 1.13
KCNA3P22001 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
KCNA3P22001 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.08■■□□□ 1.13
KCNA3P22001 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.08■■□□□ 1.13
KCNA3P22001 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.08■■□□□ 1.13
KCNA3P22001 AC122714.2-201ENST00000502787 707 ntBASIC22.08■■□□□ 1.13
KCNA3P22001 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.08■■□□□ 1.13
KCNA3P22001 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.08■■□□□ 1.13
KCNA3P22001 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.08■■□□□ 1.13
KCNA3P22001 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.08■■□□□ 1.13
KCNA3P22001 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.08■■□□□ 1.13
KCNA3P22001 AC008667.4-201ENST00000607370 168 ntBASIC22.08■■□□□ 1.13
KCNA3P22001 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
KCNA3P22001 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
KCNA3P22001 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.08■■□□□ 1.12
KCNA3P22001 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.08■■□□□ 1.12
KCNA3P22001 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.08■■□□□ 1.12
KCNA3P22001 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.08■■□□□ 1.12
KCNA3P22001 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
KCNA3P22001 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC22.07■■□□□ 1.12
KCNA3P22001 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.07■■□□□ 1.12
KCNA3P22001 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.07■■□□□ 1.12
KCNA3P22001 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
KCNA3P22001 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.07■■□□□ 1.12
KCNA3P22001 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
KCNA3P22001 AP000344.2-201ENST00000512987 629 ntBASIC22.07■■□□□ 1.12
KCNA3P22001 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
KCNA3P22001 PDPK2P-202ENST00000562415 1191 ntBASIC22.07■■□□□ 1.12
KCNA3P22001 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.07■■□□□ 1.12
KCNA3P22001 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 KRT8P47-201ENST00000604727 1398 ntBASIC22.07■■□□□ 1.12
KCNA3P22001 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KCNA3P22001 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.07■■□□□ 1.12
KCNA3P22001 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.07■■□□□ 1.12
KCNA3P22001 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms