Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT4P19013 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KRT4P19013 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
KRT4P19013 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
KRT4P19013 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT4P19013 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
KRT4P19013 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT4P19013 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KRT4P19013 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT4P19013 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 MIR149-201ENST00000384879 89 ntBASIC18.21■□□□□ 0.51
KRT4P19013 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT4P19013 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT4P19013 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 MIR6786-201ENST00000616843 113 ntBASIC18.21■□□□□ 0.51
KRT4P19013 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT4P19013 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT4P19013 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KRT4P19013 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT4P19013 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
KRT4P19013 AL355312.1-201ENST00000407115 2176 ntBASIC18.2■□□□□ 0.5
KRT4P19013 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KRT4P19013 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT4P19013 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
KRT4P19013 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT4P19013 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
KRT4P19013 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT4P19013 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT4P19013 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT4P19013 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT4P19013 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT4P19013 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
KRT4P19013 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT4P19013 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT4P19013 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT4P19013 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KRT4P19013 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.18■□□□□ 0.5
KRT4P19013 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
KRT4P19013 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT4P19013 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms