Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC145285.6-201ENST00000604632 637 ntBASIC16.66■□□□□ 0.26
BMP4P12644 AP000525.1-201ENST00000608286 694 ntBASIC16.66■□□□□ 0.26
BMP4P12644 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.66■□□□□ 0.26
BMP4P12644 AC012306.2-201ENST00000609350 630 ntBASIC16.66■□□□□ 0.26
BMP4P12644 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
BMP4P12644 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
BMP4P12644 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
BMP4P12644 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BMP4P12644 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BMP4P12644 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.65■□□□□ 0.26
BMP4P12644 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.65■□□□□ 0.26
BMP4P12644 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.65■□□□□ 0.26
BMP4P12644 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.65■□□□□ 0.26
BMP4P12644 MIR6786-201ENST00000616843 113 ntBASIC16.65■□□□□ 0.26
BMP4P12644 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.65■□□□□ 0.26
BMP4P12644 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.65■□□□□ 0.26
BMP4P12644 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
BMP4P12644 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.65■□□□□ 0.26
BMP4P12644 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BMP4P12644 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
BMP4P12644 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
BMP4P12644 LINC01568-207ENST00000641790 1380 ntBASIC16.64■□□□□ 0.26
BMP4P12644 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
BMP4P12644 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.64■□□□□ 0.25
BMP4P12644 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
BMP4P12644 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
BMP4P12644 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.64■□□□□ 0.25
BMP4P12644 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.64■□□□□ 0.25
BMP4P12644 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
BMP4P12644 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 FEM1AP3-201ENST00000403722 1741 ntBASIC16.64■□□□□ 0.25
BMP4P12644 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BMP4P12644 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BMP4P12644 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BMP4P12644 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.63■□□□□ 0.25
BMP4P12644 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BMP4P12644 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BMP4P12644 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms