Protein–RNA interactions for Protein: P04839

CYBB, Cytochrome b-245 heavy chain, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYBBP04839 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.69■□□□□ 0.58
CYBBP04839 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CYBBP04839 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CYBBP04839 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYBBP04839 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.69■□□□□ 0.58
CYBBP04839 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYBBP04839 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.69■□□□□ 0.58
CYBBP04839 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.69■□□□□ 0.58
CYBBP04839 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CYBBP04839 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYBBP04839 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYBBP04839 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.69■□□□□ 0.58
CYBBP04839 NEFHP1-201ENST00000412845 2629 ntBASIC18.69■□□□□ 0.58
CYBBP04839 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
CYBBP04839 GMCL1P1-201ENST00000463439 1581 ntBASIC18.68■□□□□ 0.58
CYBBP04839 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CYBBP04839 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.68■□□□□ 0.58
CYBBP04839 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.68■□□□□ 0.58
CYBBP04839 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.68■□□□□ 0.58
CYBBP04839 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.68■□□□□ 0.58
CYBBP04839 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.68■□□□□ 0.58
CYBBP04839 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CYBBP04839 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.68■□□□□ 0.58
CYBBP04839 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.68■□□□□ 0.58
CYBBP04839 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
CYBBP04839 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CYBBP04839 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.68■□□□□ 0.58
CYBBP04839 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYBBP04839 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CYBBP04839 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
CYBBP04839 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CYBBP04839 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.67■□□□□ 0.58
CYBBP04839 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CYBBP04839 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CYBBP04839 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.67■□□□□ 0.58
CYBBP04839 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.67■□□□□ 0.58
CYBBP04839 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.67■□□□□ 0.58
CYBBP04839 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
CYBBP04839 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CYBBP04839 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CYBBP04839 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CYBBP04839 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CYBBP04839 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.66■□□□□ 0.58
CYBBP04839 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
CYBBP04839 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.66■□□□□ 0.58
CYBBP04839 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.66■□□□□ 0.58
CYBBP04839 MINOS1P3-201ENST00000457048 203 ntBASIC18.66■□□□□ 0.58
CYBBP04839 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CYBBP04839 FOSL1P1-201ENST00000511041 816 ntBASIC18.66■□□□□ 0.58
CYBBP04839 AC091304.2-201ENST00000564639 760 ntBASIC18.66■□□□□ 0.58
CYBBP04839 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CYBBP04839 AC099336.1-202ENST00000602961 463 ntBASIC18.66■□□□□ 0.58
CYBBP04839 AL121894.2-201ENST00000602977 491 ntBASIC18.66■□□□□ 0.58
CYBBP04839 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.66■□□□□ 0.58
CYBBP04839 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.66■□□□□ 0.58
CYBBP04839 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.66■□□□□ 0.58
CYBBP04839 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms