Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.74■□□□□ 0.27
NKX2-2O95096 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
NKX2-2O95096 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.74■□□□□ 0.27
NKX2-2O95096 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NKX2-2O95096 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NKX2-2O95096 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX2-2O95096 AL133373.2-201ENST00000623187 2828 ntBASIC16.74■□□□□ 0.27
NKX2-2O95096 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX2-2O95096 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NKX2-2O95096 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX2-2O95096 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX2-2O95096 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
NKX2-2O95096 AC022898.2-201ENST00000616822 1312 ntBASIC16.73■□□□□ 0.27
NKX2-2O95096 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX2-2O95096 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NKX2-2O95096 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.73■□□□□ 0.27
NKX2-2O95096 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX2-2O95096 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.73■□□□□ 0.27
NKX2-2O95096 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
NKX2-2O95096 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.73■□□□□ 0.27
NKX2-2O95096 AP003733.1-201ENST00000491725 852 ntBASIC16.73■□□□□ 0.27
NKX2-2O95096 KRT18P21-201ENST00000515767 1272 ntBASIC16.73■□□□□ 0.27
NKX2-2O95096 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.73■□□□□ 0.27
NKX2-2O95096 ZNF444P1-201ENST00000559497 298 ntBASIC16.73■□□□□ 0.27
NKX2-2O95096 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.73■□□□□ 0.27
NKX2-2O95096 AC083849.1-201ENST00000615227 514 ntBASIC16.73■□□□□ 0.27
NKX2-2O95096 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX2-2O95096 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX2-2O95096 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX2-2O95096 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NKX2-2O95096 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX2-2O95096 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NKX2-2O95096 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
NKX2-2O95096 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.72■□□□□ 0.27
NKX2-2O95096 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NKX2-2O95096 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
NKX2-2O95096 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 IGHGP-201ENST00000390555 1178 ntBASIC16.72■□□□□ 0.27
NKX2-2O95096 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX2-2O95096 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 KRT18P65-201ENST00000439811 1286 ntBASIC16.72■□□□□ 0.27
NKX2-2O95096 SPDYE13P-201ENST00000445314 798 ntBASIC16.72■□□□□ 0.27
NKX2-2O95096 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.72■□□□□ 0.27
NKX2-2O95096 VENTXP5-201ENST00000523979 775 ntBASIC16.72■□□□□ 0.27
NKX2-2O95096 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.72■□□□□ 0.27
NKX2-2O95096 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.72■□□□□ 0.27
NKX2-2O95096 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.72■□□□□ 0.27
NKX2-2O95096 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX2-2O95096 AC004263.2-201ENST00000617183 678 ntBASIC16.72■□□□□ 0.27
NKX2-2O95096 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NKX2-2O95096 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.72■□□□□ 0.27
NKX2-2O95096 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NKX2-2O95096 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NKX2-2O95096 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms