Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 AL671277.2-201ENST00000458060 996 ntBASIC19.58■□□□□ 0.72
RNF40O75150 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
RNF40O75150 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF40O75150 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.58■□□□□ 0.72
RNF40O75150 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF40O75150 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF40O75150 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RNF40O75150 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
RNF40O75150 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF40O75150 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF40O75150 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF40O75150 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RNF40O75150 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
RNF40O75150 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
RNF40O75150 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF40O75150 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF40O75150 HTR7P1-202ENST00000624664 4411 ntBASIC19.57■□□□□ 0.72
RNF40O75150 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF40O75150 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF40O75150 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF40O75150 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.57■□□□□ 0.72
RNF40O75150 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF40O75150 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF40O75150 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF40O75150 AC093458.2-201ENST00000623150 629 ntBASIC19.57■□□□□ 0.72
RNF40O75150 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF40O75150 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF40O75150 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RNF40O75150 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF40O75150 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF40O75150 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF40O75150 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF40O75150 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF40O75150 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF40O75150 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF40O75150 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF40O75150 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF40O75150 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
RNF40O75150 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF40O75150 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF40O75150 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF40O75150 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF40O75150 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF40O75150 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF40O75150 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF40O75150 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RNF40O75150 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF40O75150 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF40O75150 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
RNF40O75150 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF40O75150 KRT8P45-201ENST00000414328 1447 ntBASIC19.55■□□□□ 0.72
RNF40O75150 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms