Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA12O60330 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA12O60330 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 AL773604.1-201ENST00000617417 272 ntBASIC17.96■□□□□ 0.47
PCDHGA12O60330 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 AC068587.9-201ENST00000641814 219 ntBASIC17.96■□□□□ 0.47
PCDHGA12O60330 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PCDHGA12O60330 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA12O60330 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
PCDHGA12O60330 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
PCDHGA12O60330 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHGA12O60330 AC141586.3-201ENST00000562166 1838 ntBASIC17.95■□□□□ 0.46
PCDHGA12O60330 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 AC091607.1-201ENST00000490318 1060 ntBASIC17.95■□□□□ 0.46
PCDHGA12O60330 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 RNA5SP419-201ENST00000515908 135 ntBASIC17.95■□□□□ 0.46
PCDHGA12O60330 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA12O60330 TP73-AS1-207ENST00000624167 988 ntBASIC17.95■□□□□ 0.46
PCDHGA12O60330 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 AC005332.8-201ENST00000622750 2735 ntBASIC17.95■□□□□ 0.46
PCDHGA12O60330 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA12O60330 FP475955.4-201ENST00000623131 1990 ntBASIC17.95■□□□□ 0.46
PCDHGA12O60330 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 AC009113.1-201ENST00000570267 2443 ntBASIC17.94■□□□□ 0.46
PCDHGA12O60330 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms