Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PDE6DO43924 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDE6DO43924 AC133963.1-201ENST00000504166 1679 ntBASIC14.07□□□□□ -0.16
PDE6DO43924 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PDE6DO43924 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PDE6DO43924 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.07□□□□□ -0.16
PDE6DO43924 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PDE6DO43924 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.07□□□□□ -0.16
PDE6DO43924 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.07□□□□□ -0.16
PDE6DO43924 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.07□□□□□ -0.16
PDE6DO43924 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.07□□□□□ -0.16
PDE6DO43924 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.07□□□□□ -0.16
PDE6DO43924 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDE6DO43924 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.07□□□□□ -0.16
PDE6DO43924 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
PDE6DO43924 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PDE6DO43924 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.06□□□□□ -0.16
PDE6DO43924 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.06□□□□□ -0.16
PDE6DO43924 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.06□□□□□ -0.16
PDE6DO43924 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 AC231657.2-201ENST00000624556 255 ntBASIC14.06□□□□□ -0.16
PDE6DO43924 AC092437.1-201ENST00000624794 1048 ntBASIC14.06□□□□□ -0.16
PDE6DO43924 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.06□□□□□ -0.16
PDE6DO43924 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PDE6DO43924 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PDE6DO43924 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PDE6DO43924 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.06□□□□□ -0.16
PDE6DO43924 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PDE6DO43924 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.06□□□□□ -0.16
PDE6DO43924 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDE6DO43924 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 KRT8P41-201ENST00000533985 1514 ntBASIC14.05□□□□□ -0.16
PDE6DO43924 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PDE6DO43924 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.05□□□□□ -0.16
PDE6DO43924 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PDE6DO43924 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PDE6DO43924 UBALD1-205ENST00000590891 2641 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms