Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.34■□□□□ 0.85
ACTN4O43707 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.34■□□□□ 0.85
ACTN4O43707 AC092865.7-201ENST00000641832 219 ntBASIC20.34■□□□□ 0.85
ACTN4O43707 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.34■□□□□ 0.85
ACTN4O43707 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ACTN4O43707 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.34■□□□□ 0.85
ACTN4O43707 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ACTN4O43707 AC100803.2-201ENST00000562459 1963 ntBASIC20.34■□□□□ 0.85
ACTN4O43707 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.33■□□□□ 0.85
ACTN4O43707 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.33■□□□□ 0.85
ACTN4O43707 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ACTN4O43707 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.33■□□□□ 0.85
ACTN4O43707 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 AC087499.1-201ENST00000418141 1075 ntBASIC20.33■□□□□ 0.85
ACTN4O43707 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.33■□□□□ 0.85
ACTN4O43707 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.33■□□□□ 0.85
ACTN4O43707 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.33■□□□□ 0.85
ACTN4O43707 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
ACTN4O43707 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ACTN4O43707 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ACTN4O43707 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ACTN4O43707 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ACTN4O43707 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ACTN4O43707 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
ACTN4O43707 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 PVRIG2P-201ENST00000435460 978 ntBASIC20.32■□□□□ 0.84
ACTN4O43707 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.32■□□□□ 0.84
ACTN4O43707 AC145285.6-201ENST00000604632 637 ntBASIC20.32■□□□□ 0.84
ACTN4O43707 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 AC141257.4-201ENST00000634557 245 ntBASIC20.32■□□□□ 0.84
ACTN4O43707 AC136944.6-201ENST00000634818 245 ntBASIC20.32■□□□□ 0.84
ACTN4O43707 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.32■□□□□ 0.84
ACTN4O43707 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ACTN4O43707 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ACTN4O43707 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.31■□□□□ 0.84
ACTN4O43707 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
ACTN4O43707 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 KRT18P22-201ENST00000402024 1347 ntBASIC20.31■□□□□ 0.84
ACTN4O43707 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ACTN4O43707 AC090340.1-201ENST00000620778 4980 ntBASIC20.31■□□□□ 0.84
ACTN4O43707 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ACTN4O43707 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.31■□□□□ 0.84
ACTN4O43707 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.31■□□□□ 0.84
ACTN4O43707 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.31■□□□□ 0.84
ACTN4O43707 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ACTN4O43707 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.31■□□□□ 0.84
ACTN4O43707 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN4O43707 GCSHP2-201ENST00000560971 527 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms