Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
KCNQ3O43525 KRT8P47-201ENST00000604727 1398 ntBASIC23.18■■□□□ 1.3
KCNQ3O43525 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNQ3O43525 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
KCNQ3O43525 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
KCNQ3O43525 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNQ3O43525 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.18■■□□□ 1.3
KCNQ3O43525 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
KCNQ3O43525 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNQ3O43525 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 AC093010.1-201ENST00000473625 1624 ntBASIC23.18■■□□□ 1.3
KCNQ3O43525 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNQ3O43525 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNQ3O43525 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
KCNQ3O43525 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.17■■□□□ 1.3
KCNQ3O43525 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 WIZP1-201ENST00000531444 2299 ntBASIC23.17■■□□□ 1.3
KCNQ3O43525 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 AC093503.3-201ENST00000624917 2352 ntBASIC23.17■■□□□ 1.3
KCNQ3O43525 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.17■■□□□ 1.3
KCNQ3O43525 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
KCNQ3O43525 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
KCNQ3O43525 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 DANCR-204ENST00000444958 709 ntTSL 3 BASIC23.17■■□□□ 1.3
KCNQ3O43525 ABCD1P5-201ENST00000445663 754 ntBASIC23.17■■□□□ 1.3
KCNQ3O43525 AC021087.4-201ENST00000563761 564 ntBASIC23.17■■□□□ 1.3
KCNQ3O43525 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.17■■□□□ 1.3
KCNQ3O43525 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.17■■□□□ 1.3
KCNQ3O43525 FAM215A-202ENST00000632077 792 ntBASIC23.17■■□□□ 1.3
KCNQ3O43525 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.17■■□□□ 1.3
KCNQ3O43525 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
KCNQ3O43525 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
KCNQ3O43525 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNQ3O43525 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
KCNQ3O43525 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNQ3O43525 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
KCNQ3O43525 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNQ3O43525 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNQ3O43525 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KCNQ3O43525 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNQ3O43525 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNQ3O43525 RBM17P3-201ENST00000417687 1192 ntBASIC23.16■■□□□ 1.3
KCNQ3O43525 AC007967.3-201ENST00000434308 558 ntBASIC23.16■■□□□ 1.3
KCNQ3O43525 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.16■■□□□ 1.3
KCNQ3O43525 AF186996.4-201ENST00000467186 377 ntBASIC23.16■■□□□ 1.3
KCNQ3O43525 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.16■■□□□ 1.3
KCNQ3O43525 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.16■■□□□ 1.3
KCNQ3O43525 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.16■■□□□ 1.3
KCNQ3O43525 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KCNQ3O43525 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNQ3O43525 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNQ3O43525 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNQ3O43525 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNQ3O43525 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNQ3O43525 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNQ3O43525 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KCNQ3O43525 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNQ3O43525 AC010460.3-201ENST00000511359 1579 ntBASIC23.15■■□□□ 1.3
KCNQ3O43525 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
KCNQ3O43525 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.15■■□□□ 1.3
KCNQ3O43525 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
KCNQ3O43525 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNQ3O43525 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNQ3O43525 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.15■■□□□ 1.3
KCNQ3O43525 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.15■■□□□ 1.3
KCNQ3O43525 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.15■■□□□ 1.3
KCNQ3O43525 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.15■■□□□ 1.3
KCNQ3O43525 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNQ3O43525 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNQ3O43525 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNQ3O43525 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNQ3O43525 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
KCNQ3O43525 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNQ3O43525 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.3
KCNQ3O43525 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
KCNQ3O43525 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
KCNQ3O43525 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNQ3O43525 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
KCNQ3O43525 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms