Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
COCHO43405 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 AC009078.2-202ENST00000463353 338 ntBASIC18.68■□□□□ 0.58
COCHO43405 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.68■□□□□ 0.58
COCHO43405 AL160237.2-201ENST00000556165 472 ntBASIC18.68■□□□□ 0.58
COCHO43405 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.68■□□□□ 0.58
COCHO43405 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COCHO43405 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COCHO43405 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COCHO43405 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
COCHO43405 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.67■□□□□ 0.58
COCHO43405 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COCHO43405 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.67■□□□□ 0.58
COCHO43405 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.67■□□□□ 0.58
COCHO43405 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.67■□□□□ 0.58
COCHO43405 AF238378.1-201ENST00000526806 358 ntBASIC18.67■□□□□ 0.58
COCHO43405 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.67■□□□□ 0.58
COCHO43405 AL121912.1-201ENST00000603683 238 ntBASIC18.67■□□□□ 0.58
COCHO43405 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COCHO43405 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.67■□□□□ 0.58
COCHO43405 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
COCHO43405 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.67■□□□□ 0.58
COCHO43405 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.67■□□□□ 0.58
COCHO43405 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.67■□□□□ 0.58
COCHO43405 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COCHO43405 AC093677.2-201ENST00000600169 1863 ntBASIC18.67■□□□□ 0.58
COCHO43405 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COCHO43405 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
COCHO43405 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
COCHO43405 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.66■□□□□ 0.58
COCHO43405 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.66■□□□□ 0.58
COCHO43405 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 AC132008.2-207ENST00000454517 770 ntBASIC18.66■□□□□ 0.58
COCHO43405 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.66■□□□□ 0.58
COCHO43405 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.66■□□□□ 0.58
COCHO43405 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.66■□□□□ 0.58
COCHO43405 AC011467.2-201ENST00000598425 242 ntBASIC18.66■□□□□ 0.58
COCHO43405 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.66■□□□□ 0.58
COCHO43405 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.66■□□□□ 0.58
COCHO43405 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
COCHO43405 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 AL096828.2-201ENST00000567259 1965 ntBASIC18.66■□□□□ 0.58
COCHO43405 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COCHO43405 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.66■□□□□ 0.58
COCHO43405 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COCHO43405 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms