Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHD1O14646 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHD1O14646 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC29.13■■■□□ 2.25
CHD1O14646 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHD1O14646 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC29.13■■■□□ 2.25
CHD1O14646 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHD1O14646 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC29.13■■■□□ 2.25
CHD1O14646 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHD1O14646 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD1O14646 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD1O14646 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD1O14646 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC29.12■■■□□ 2.25
CHD1O14646 NOP2-220ENST00000545915 630 ntTSL 2 BASIC29.12■■■□□ 2.25
CHD1O14646 VPS29-207ENST00000549970 818 ntTSL 3 BASIC29.12■■■□□ 2.25
CHD1O14646 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC29.12■■■□□ 2.25
CHD1O14646 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC29.12■■■□□ 2.25
CHD1O14646 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC29.12■■■□□ 2.25
CHD1O14646 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD1O14646 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD1O14646 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC29.12■■■□□ 2.25
CHD1O14646 AC025580.3-201ENST00000617932 1424 ntBASIC29.12■■■□□ 2.25
CHD1O14646 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CHD1O14646 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CHD1O14646 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC29.12■■■□□ 2.25
CHD1O14646 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC29.12■■■□□ 2.25
CHD1O14646 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC29.11■■■□□ 2.25
CHD1O14646 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 NEK7-201ENST00000367383 586 ntTSL 2 BASIC29.11■■■□□ 2.25
CHD1O14646 DDT-204ENST00000404092 805 ntTSL 3 BASIC29.11■■■□□ 2.25
CHD1O14646 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC29.11■■■□□ 2.25
CHD1O14646 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
CHD1O14646 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC29.11■■■□□ 2.25
CHD1O14646 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
CHD1O14646 AL353593.2-201ENST00000602529 1483 ntBASIC29.11■■■□□ 2.25
CHD1O14646 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC29.11■■■□□ 2.25
CHD1O14646 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC29.11■■■□□ 2.25
CHD1O14646 AC074386.1-202ENST00000463561 864 ntBASIC29.11■■■□□ 2.25
CHD1O14646 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC29.11■■■□□ 2.25
CHD1O14646 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD1O14646 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD1O14646 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CHD1O14646 AC006116.8-202ENST00000587620 1550 ntBASIC29.1■■■□□ 2.25
CHD1O14646 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC29.1■■■□□ 2.25
CHD1O14646 AC092919.2-201ENST00000623631 1645 ntBASIC29.1■■■□□ 2.25
CHD1O14646 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC29.1■■■□□ 2.25
CHD1O14646 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD1O14646 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CHD1O14646 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC29.1■■■□□ 2.25
CHD1O14646 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC29.1■■■□□ 2.25
CHD1O14646 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD1O14646 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC29.1■■■□□ 2.25
CHD1O14646 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD1O14646 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC29.09■■■□□ 2.25
CHD1O14646 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC29.09■■■□□ 2.25
CHD1O14646 AL008721.1-201ENST00000609964 604 ntBASIC29.09■■■□□ 2.25
CHD1O14646 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
CHD1O14646 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC29.09■■■□□ 2.25
CHD1O14646 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHD1O14646 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHD1O14646 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC29.08■■■□□ 2.25
CHD1O14646 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC29.08■■■□□ 2.25
CHD1O14646 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHD1O14646 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC29.08■■■□□ 2.25
CHD1O14646 MED16-214ENST00000617672 554 ntTSL 5 BASIC29.08■■■□□ 2.25
CHD1O14646 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC29.08■■■□□ 2.25
CHD1O14646 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHD1O14646 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC29.08■■■□□ 2.25
CHD1O14646 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHD1O14646 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC29.08■■■□□ 2.25
CHD1O14646 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
CHD1O14646 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHD1O14646 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHD1O14646 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC29.08■■■□□ 2.25
CHD1O14646 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHD1O14646 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC29.08■■■□□ 2.25
CHD1O14646 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC29.08■■■□□ 2.25
CHD1O14646 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC29.07■■■□□ 2.24
CHD1O14646 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC29.07■■■□□ 2.24
CHD1O14646 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC29.07■■■□□ 2.24
CHD1O14646 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC29.07■■■□□ 2.24
CHD1O14646 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
CHD1O14646 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms