Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.39■□□□□ 0.37
CDX4O14627 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.39■□□□□ 0.37
CDX4O14627 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.39■□□□□ 0.37
CDX4O14627 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.39■□□□□ 0.37
CDX4O14627 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CDX4O14627 AC027612.4-201ENST00000605371 583 ntBASIC17.39■□□□□ 0.37
CDX4O14627 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.39■□□□□ 0.37
CDX4O14627 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.39■□□□□ 0.37
CDX4O14627 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.39■□□□□ 0.37
CDX4O14627 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDX4O14627 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.39■□□□□ 0.37
CDX4O14627 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDX4O14627 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDX4O14627 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
CDX4O14627 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 SPDYE21P-201ENST00000413323 827 ntBASIC17.38■□□□□ 0.37
CDX4O14627 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX4O14627 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX4O14627 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX4O14627 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.38■□□□□ 0.37
CDX4O14627 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.38■□□□□ 0.37
CDX4O14627 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 AL589182.2-201ENST00000619332 1049 ntBASIC17.38■□□□□ 0.37
CDX4O14627 AC004706.3-202ENST00000621574 984 ntBASIC17.38■□□□□ 0.37
CDX4O14627 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.38■□□□□ 0.37
CDX4O14627 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.38■□□□□ 0.37
CDX4O14627 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDX4O14627 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDX4O14627 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 GPR89P-201ENST00000407924 1495 ntBASIC17.37■□□□□ 0.37
CDX4O14627 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.37■□□□□ 0.37
CDX4O14627 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDX4O14627 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
CDX4O14627 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.37■□□□□ 0.37
CDX4O14627 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.37■□□□□ 0.37
CDX4O14627 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 AL032819.2-201ENST00000624543 2162 ntBASIC17.37■□□□□ 0.37
CDX4O14627 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
CDX4O14627 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDX4O14627 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDX4O14627 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
CDX4O14627 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.36■□□□□ 0.37
CDX4O14627 AC006504.4-201ENST00000592118 1568 ntBASIC17.36■□□□□ 0.37
CDX4O14627 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDX4O14627 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
CDX4O14627 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.36■□□□□ 0.37
CDX4O14627 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.36■□□□□ 0.37
CDX4O14627 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDX4O14627 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDX4O14627 AC108073.2-201ENST00000464002 357 ntBASIC17.36■□□□□ 0.37
CDX4O14627 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDX4O14627 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.36■□□□□ 0.37
CDX4O14627 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.36■□□□□ 0.37
CDX4O14627 AL031432.2-201ENST00000566714 459 ntBASIC17.36■□□□□ 0.37
CDX4O14627 AL928711.1-201ENST00000570165 459 ntBASIC17.36■□□□□ 0.37
CDX4O14627 MIR4751-201ENST00000578027 74 ntBASIC17.36■□□□□ 0.37
CDX4O14627 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.36■□□□□ 0.37
CDX4O14627 AC093028.1-201ENST00000622998 982 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms