Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 MIR718-201ENST00000390190 70 ntBASIC17.59■□□□□ 0.41
UBFD1O14562 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
UBFD1O14562 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 SNORA78-201ENST00000459373 127 ntBASIC17.59■□□□□ 0.41
UBFD1O14562 DUTP2-201ENST00000519164 463 ntBASIC17.59■□□□□ 0.41
UBFD1O14562 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.59■□□□□ 0.41
UBFD1O14562 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 C2orf69P3-201ENST00000565542 1120 ntBASIC17.59■□□□□ 0.41
UBFD1O14562 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.59■□□□□ 0.41
UBFD1O14562 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.59■□□□□ 0.41
UBFD1O14562 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.59■□□□□ 0.41
UBFD1O14562 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
UBFD1O14562 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
UBFD1O14562 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBFD1O14562 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
UBFD1O14562 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.58■□□□□ 0.4
UBFD1O14562 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.58■□□□□ 0.4
UBFD1O14562 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 AC024243.1-201ENST00000609234 778 ntBASIC17.58■□□□□ 0.4
UBFD1O14562 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.58■□□□□ 0.4
UBFD1O14562 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 SIRPAP1-201ENST00000448467 1770 ntBASIC17.58■□□□□ 0.4
UBFD1O14562 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UBFD1O14562 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
UBFD1O14562 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
UBFD1O14562 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
UBFD1O14562 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBFD1O14562 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBFD1O14562 PCDHA12-202ENST00000613593 2588 ntBASIC17.57■□□□□ 0.4
UBFD1O14562 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.57■□□□□ 0.4
UBFD1O14562 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.57■□□□□ 0.4
UBFD1O14562 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UBFD1O14562 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBFD1O14562 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.57■□□□□ 0.4
UBFD1O14562 EGLN1P1-201ENST00000531623 762 ntBASIC17.57■□□□□ 0.4
UBFD1O14562 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.57■□□□□ 0.4
UBFD1O14562 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms