Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
UPK2O00526 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UPK2O00526 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UPK2O00526 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK2O00526 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.57□□□□□ -0.08
UPK2O00526 LTB4R2-202ENST00000528054 3092 ntBASIC14.57□□□□□ -0.08
UPK2O00526 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UPK2O00526 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.56□□□□□ -0.08
UPK2O00526 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UPK2O00526 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UPK2O00526 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UPK2O00526 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 AC012317.2-201ENST00000623305 2251 ntBASIC14.56□□□□□ -0.08
UPK2O00526 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.56□□□□□ -0.08
UPK2O00526 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UPK2O00526 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UPK2O00526 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 SNORA78-201ENST00000459373 127 ntBASIC14.56□□□□□ -0.08
UPK2O00526 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
UPK2O00526 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK2O00526 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UPK2O00526 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK2O00526 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
UPK2O00526 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.56□□□□□ -0.08
UPK2O00526 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UPK2O00526 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
UPK2O00526 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK2O00526 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UPK2O00526 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK2O00526 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK2O00526 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
UPK2O00526 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
UPK2O00526 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK2O00526 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK2O00526 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK2O00526 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.55□□□□□ -0.08
UPK2O00526 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.55□□□□□ -0.08
UPK2O00526 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.55□□□□□ -0.08
UPK2O00526 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 TMEM191A-211ENST00000637163 1067 ntBASIC14.55□□□□□ -0.08
UPK2O00526 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK2O00526 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.55□□□□□ -0.08
UPK2O00526 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
UPK2O00526 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UPK2O00526 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
UPK2O00526 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.54□□□□□ -0.08
UPK2O00526 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
UPK2O00526 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 INGX-201ENST00000359239 846 ntBASIC14.54□□□□□ -0.08
UPK2O00526 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UPK2O00526 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms