Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGN4O00479 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGN4O00479 AP000523.1-201ENST00000398242 1049 ntBASIC16.87■□□□□ 0.29
HMGN4O00479 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGN4O00479 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.87■□□□□ 0.29
HMGN4O00479 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.87■□□□□ 0.29
HMGN4O00479 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
HMGN4O00479 AL157888.1-201ENST00000631930 593 ntBASIC16.87■□□□□ 0.29
HMGN4O00479 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HMGN4O00479 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGN4O00479 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HMGN4O00479 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HMGN4O00479 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HMGN4O00479 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGN4O00479 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HMGN4O00479 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGN4O00479 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGN4O00479 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGN4O00479 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.86■□□□□ 0.29
HMGN4O00479 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
HMGN4O00479 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 PVRIG2P-201ENST00000435460 978 ntBASIC16.86■□□□□ 0.29
HMGN4O00479 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 AC141257.4-201ENST00000634557 245 ntBASIC16.86■□□□□ 0.29
HMGN4O00479 AC136944.6-201ENST00000634818 245 ntBASIC16.86■□□□□ 0.29
HMGN4O00479 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 LTB4R2-202ENST00000528054 3092 ntBASIC16.86■□□□□ 0.29
HMGN4O00479 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.86■□□□□ 0.29
HMGN4O00479 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HMGN4O00479 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HMGN4O00479 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
HMGN4O00479 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN4O00479 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN4O00479 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGN4O00479 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN4O00479 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN4O00479 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN4O00479 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN4O00479 AC145285.6-201ENST00000604632 637 ntBASIC16.85■□□□□ 0.29
HMGN4O00479 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN4O00479 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGN4O00479 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGN4O00479 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGN4O00479 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HMGN4O00479 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms