Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 AL023806.1-201ENST00000603994 1649 ntBASIC16.79■□□□□ 0.28
TNFRSF11BO00300 OR6D1P-203ENST00000641209 4860 ntBASIC16.79■□□□□ 0.28
TNFRSF11BO00300 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 FSCN1P1-201ENST00000568912 1481 ntBASIC16.79■□□□□ 0.28
TNFRSF11BO00300 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TNFRSF11BO00300 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 AF186192.3-201ENST00000583427 947 ntBASIC16.78■□□□□ 0.28
TNFRSF11BO00300 MIR3180-5-201ENST00000583743 153 ntBASIC16.78■□□□□ 0.28
TNFRSF11BO00300 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.78■□□□□ 0.28
TNFRSF11BO00300 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF11BO00300 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 AC073648.6-201ENST00000641589 218 ntBASIC16.77■□□□□ 0.28
TNFRSF11BO00300 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF11BO00300 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF11BO00300 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF11BO00300 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF11BO00300 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TNFRSF11BO00300 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.77■□□□□ 0.27
TNFRSF11BO00300 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF11BO00300 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.77■□□□□ 0.27
TNFRSF11BO00300 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF11BO00300 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNFRSF11BO00300 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNFRSF11BO00300 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF11BO00300 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms