Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.65■□□□□ 0.58
DFFAO00273 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 ZNF444P1-201ENST00000559497 298 ntBASIC18.65■□□□□ 0.58
DFFAO00273 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.65■□□□□ 0.58
DFFAO00273 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.65■□□□□ 0.58
DFFAO00273 AC083849.1-201ENST00000615227 514 ntBASIC18.65■□□□□ 0.58
DFFAO00273 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.65■□□□□ 0.58
DFFAO00273 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.65■□□□□ 0.58
DFFAO00273 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DFFAO00273 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DFFAO00273 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.65■□□□□ 0.58
DFFAO00273 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.65■□□□□ 0.58
DFFAO00273 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DFFAO00273 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.64■□□□□ 0.58
DFFAO00273 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DFFAO00273 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
DFFAO00273 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DFFAO00273 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DFFAO00273 AC018470.1-201ENST00000624790 3129 ntBASIC18.64■□□□□ 0.57
DFFAO00273 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.64■□□□□ 0.57
DFFAO00273 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.64■□□□□ 0.57
DFFAO00273 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DFFAO00273 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 KRT18P48-201ENST00000434763 852 ntBASIC18.64■□□□□ 0.57
DFFAO00273 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.64■□□□□ 0.57
DFFAO00273 AC008687.5-201ENST00000593746 558 ntBASIC18.64■□□□□ 0.57
DFFAO00273 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.64■□□□□ 0.57
DFFAO00273 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.64■□□□□ 0.57
DFFAO00273 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.64■□□□□ 0.57
DFFAO00273 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
DFFAO00273 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.64■□□□□ 0.57
DFFAO00273 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
DFFAO00273 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DFFAO00273 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.63■□□□□ 0.57
DFFAO00273 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
DFFAO00273 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.63■□□□□ 0.57
DFFAO00273 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.63■□□□□ 0.57
DFFAO00273 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.63■□□□□ 0.57
DFFAO00273 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.63■□□□□ 0.57
DFFAO00273 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
DFFAO00273 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.63■□□□□ 0.57
DFFAO00273 AL590326.2-201ENST00000625139 305 ntBASIC18.63■□□□□ 0.57
DFFAO00273 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DFFAO00273 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DFFAO00273 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.63■□□□□ 0.57
DFFAO00273 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
DFFAO00273 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.62■□□□□ 0.57
DFFAO00273 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DFFAO00273 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms