Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 MFAP1P1-201ENST00000442257 1255 ntBASIC18.86■□□□□ 0.61
CCDC188H7C350 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC188H7C350 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 AC124067.4-201ENST00000519691 2379 ntBASIC18.86■□□□□ 0.61
CCDC188H7C350 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
CCDC188H7C350 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC188H7C350 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC188H7C350 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC188H7C350 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC188H7C350 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC188H7C350 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC188H7C350 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC188H7C350 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC188H7C350 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC188H7C350 AC022211.2-201ENST00000585075 2527 ntBASIC18.85■□□□□ 0.61
CCDC188H7C350 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC188H7C350 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC188H7C350 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC188H7C350 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CCDC188H7C350 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 KRT18P23-201ENST00000435622 1283 ntBASIC18.84■□□□□ 0.61
CCDC188H7C350 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC188H7C350 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 AC073648.6-201ENST00000641589 218 ntBASIC18.84■□□□□ 0.61
CCDC188H7C350 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CCDC188H7C350 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 AL024508.2-201ENST00000607749 1894 ntBASIC18.84■□□□□ 0.61
CCDC188H7C350 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC188H7C350 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC188H7C350 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC188H7C350 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC188H7C350 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC188H7C350 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC188H7C350 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC188H7C350 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC188H7C350 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC188H7C350 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CCDC188H7C350 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC188H7C350 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC188H7C350 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC188H7C350 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC188H7C350 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC188H7C350 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC188H7C350 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC188H7C350 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC188H7C350 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC188H7C350 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms