Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.79■□□□□ 0.44
VGLL3A8MV65 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VGLL3A8MV65 AC063926.3-201ENST00000624734 5658 ntBASIC17.78■□□□□ 0.44
VGLL3A8MV65 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 AC126177.1-201ENST00000547829 2218 ntBASIC17.78■□□□□ 0.44
VGLL3A8MV65 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 ZNRF2P3-201ENST00000424200 374 ntBASIC17.78■□□□□ 0.44
VGLL3A8MV65 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.78■□□□□ 0.44
VGLL3A8MV65 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VGLL3A8MV65 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.78■□□□□ 0.44
VGLL3A8MV65 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VGLL3A8MV65 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.77■□□□□ 0.44
VGLL3A8MV65 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VGLL3A8MV65 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
VGLL3A8MV65 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.77■□□□□ 0.44
VGLL3A8MV65 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VGLL3A8MV65 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VGLL3A8MV65 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.77■□□□□ 0.44
VGLL3A8MV65 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.77■□□□□ 0.44
VGLL3A8MV65 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VGLL3A8MV65 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VGLL3A8MV65 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VGLL3A8MV65 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VGLL3A8MV65 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VGLL3A8MV65 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
VGLL3A8MV65 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
VGLL3A8MV65 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
VGLL3A8MV65 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
VGLL3A8MV65 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.77■□□□□ 0.43
VGLL3A8MV65 CR383656.2-201ENST00000548656 2254 ntBASIC17.77■□□□□ 0.43
VGLL3A8MV65 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
VGLL3A8MV65 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VGLL3A8MV65 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VGLL3A8MV65 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
VGLL3A8MV65 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VGLL3A8MV65 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.76■□□□□ 0.43
VGLL3A8MV65 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VGLL3A8MV65 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VGLL3A8MV65 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.76■□□□□ 0.43
VGLL3A8MV65 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.76■□□□□ 0.43
VGLL3A8MV65 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms