Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.03■□□□□ 0.96
SSC5DA1L4H1 AC002310.6-201ENST00000624451 1377 ntBASIC21.03■□□□□ 0.96
SSC5DA1L4H1 KRT18P28-201ENST00000453838 1332 ntBASIC21.02■□□□□ 0.96
SSC5DA1L4H1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 HTR5BP-201ENST00000430851 1154 ntBASIC21.02■□□□□ 0.96
SSC5DA1L4H1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 AC122714.2-201ENST00000502787 707 ntBASIC21.02■□□□□ 0.96
SSC5DA1L4H1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSC5DA1L4H1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 AC108073.2-201ENST00000464002 357 ntBASIC21.02■□□□□ 0.95
SSC5DA1L4H1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.02■□□□□ 0.95
SSC5DA1L4H1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 AC148477.5-201ENST00000625164 1645 ntBASIC21.01■□□□□ 0.95
SSC5DA1L4H1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSC5DA1L4H1 MIR4469-201ENST00000583919 79 ntBASIC21.01■□□□□ 0.95
SSC5DA1L4H1 PGM5P2-202ENST00000637225 1043 ntBASIC21.01■□□□□ 0.95
SSC5DA1L4H1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SSC5DA1L4H1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SSC5DA1L4H1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21■□□□□ 0.95
SSC5DA1L4H1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21■□□□□ 0.95
SSC5DA1L4H1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21■□□□□ 0.95
SSC5DA1L4H1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 AC018845.2-201ENST00000568326 409 ntBASIC21■□□□□ 0.95
SSC5DA1L4H1 AL513190.1-201ENST00000621254 727 ntBASIC21■□□□□ 0.95
SSC5DA1L4H1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21■□□□□ 0.95
SSC5DA1L4H1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SSC5DA1L4H1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSC5DA1L4H1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 PRYP5-201ENST00000451909 266 ntBASIC20.99■□□□□ 0.95
SSC5DA1L4H1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 AC006504.4-201ENST00000592118 1568 ntBASIC20.99■□□□□ 0.95
SSC5DA1L4H1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SSC5DA1L4H1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.98■□□□□ 0.95
SSC5DA1L4H1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms