Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC024243.1-201ENST00000609234 778 ntBASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC093458.2-201ENST00000623150 629 ntBASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF444P1-201ENST00000559497 298 ntBASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TCRBV4S1A1TA0A5B7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC008764.6-201ENST00000595909 2069 ntBASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV4S1A1TA0A5B7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV4S1A1TA0A5B7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TCRBV4S1A1TA0A5B7 AL357033.4-201ENST00000617703 1807 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms