Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 MFAP1P1-201ENST00000442257 1255 ntBASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 GCSHP5-201ENST00000443090 522 ntBASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 UBE2SP1-201ENST00000450587 669 ntBASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 AL109659.2-201ENST00000606809 1674 ntBASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC008556.1-201ENST00000610908 2040 ntBASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF103-CHMP3A0A140T963 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC138028.4-201ENST00000564984 1845 ntBASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 RPS2P55-201ENST00000397318 883 ntBASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC107956.1-201ENST00000494359 873 ntBASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC116562.2-201ENST00000507042 360 ntBASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF103-CHMP3A0A140T963 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC012618.2-201ENST00000428058 849 ntBASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC008622.2-201ENST00000617006 1229 ntBASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC113410.3-201ENST00000623366 203 ntBASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF103-CHMP3A0A140T963 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms