Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV4-28A0A0C4DH34 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
IGHV4-28A0A0C4DH34 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 LINC00265-3P-201ENST00000447588 903 ntBASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 GMCL1P1-201ENST00000463439 1581 ntBASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.09□□□□□ -0.31
IGHV4-28A0A0C4DH34 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IGHV4-28A0A0C4DH34 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
IGHV4-28A0A0C4DH34 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
IGHV4-28A0A0C4DH34 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
IGHV4-28A0A0C4DH34 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC113404.2-201ENST00000507884 177 ntBASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 MIR3180-1-201ENST00000580374 94 ntBASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 MIR3180-3-201ENST00000584616 94 ntBASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 CLEC4GP1-201ENST00000596555 870 ntBASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AL592071.1-201ENST00000611956 408 ntBASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 AC124864.1-201ENST00000623408 392 ntBASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC01126-201ENST00000623515 1646 ntBASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGHV4-28A0A0C4DH34 FER1L4-210ENST00000615531 5998 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms