Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV30A0A087WSZ9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 GNAS-203ENST00000306120 1878 ntBASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 AC068880.1-201ENST00000507289 2297 ntBASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 C2orf69P3-201ENST00000565542 1120 ntBASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 AC116562.4-202ENST00000641738 218 ntBASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV30A0A087WSZ9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 REXO1L9P-201ENST00000604264 2108 ntBASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV30A0A087WSZ9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 AP003041.3-201ENST00000527151 707 ntBASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 AL023803.3-201ENST00000615559 522 ntBASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV30A0A087WSZ9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 AP006294.2-201ENST00000641667 209 ntBASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV30A0A087WSZ9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms