Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 CA15P1-201ENST00000481698 905 ntBASIC17.21■□□□□ 0.35
GPC6Q9Y625 FITM1-202ENST00000559294 800 ntBASIC17.21■□□□□ 0.35
GPC6Q9Y625 AP000525.1-201ENST00000608286 694 ntBASIC17.21■□□□□ 0.35
GPC6Q9Y625 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC6Q9Y625 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GPC6Q9Y625 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPC6Q9Y625 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GPC6Q9Y625 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPC6Q9Y625 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GPC6Q9Y625 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 MIR564-202ENST00000385049 94 ntBASIC17.2■□□□□ 0.34
GPC6Q9Y625 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC6Q9Y625 AL023284.2-201ENST00000405850 579 ntBASIC17.2■□□□□ 0.34
GPC6Q9Y625 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
GPC6Q9Y625 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GPC6Q9Y625 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC6Q9Y625 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.2■□□□□ 0.34
GPC6Q9Y625 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GPC6Q9Y625 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 SIRPAP1-201ENST00000448467 1770 ntBASIC17.2■□□□□ 0.34
GPC6Q9Y625 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC6Q9Y625 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 MIR1238-201ENST00000408483 83 ntBASIC17.19■□□□□ 0.34
GPC6Q9Y625 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 GPAT2P1-201ENST00000444924 1672 ntBASIC17.19■□□□□ 0.34
GPC6Q9Y625 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GPC6Q9Y625 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC6Q9Y625 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC6Q9Y625 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC6Q9Y625 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC6Q9Y625 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 AP000593.1-201ENST00000393668 712 ntBASIC17.18■□□□□ 0.34
GPC6Q9Y625 MCCD1P1-208ENST00000445732 328 ntBASIC17.18■□□□□ 0.34
GPC6Q9Y625 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC6Q9Y625 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 ESPNP-201ENST00000270691 2015 ntBASIC17.18■□□□□ 0.34
GPC6Q9Y625 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GPC6Q9Y625 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC6Q9Y625 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC6Q9Y625 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC6Q9Y625 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 AC008764.6-201ENST00000595909 2069 ntBASIC17.17■□□□□ 0.34
GPC6Q9Y625 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC6Q9Y625 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GPC6Q9Y625 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms