Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 AL121956.5-201ENST00000625261 221 ntBASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 AC009102.3-201ENST00000623118 1491 ntBASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPH3AQ9Y2J0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 PCED1CP-201ENST00000419887 785 ntBASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 FAM86EP-206ENST00000510506 987 ntBASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RPH3AQ9Y2J0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RPH3AQ9Y2J0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RPH3AQ9Y2J0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.64■□□□□ 0.26
RPH3AQ9Y2J0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.64■□□□□ 0.26
RPH3AQ9Y2J0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
RPH3AQ9Y2J0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 MIR149-201ENST00000384879 89 ntBASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 PVRIG2P-201ENST00000435460 978 ntBASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 SPDYE13P-201ENST00000445314 798 ntBASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 AC005332.1-201ENST00000577698 1310 ntBASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 FZD10-202ENST00000539839 3282 ntBASIC16.64■□□□□ 0.25
RPH3AQ9Y2J0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
RPH3AQ9Y2J0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms