Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSX2IPQ9Y2D8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.52■□□□□ 0.71
SSX2IPQ9Y2D8 AC093484.2-201ENST00000580996 2166 ntBASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 AC079781.3-201ENST00000449110 356 ntBASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 MINOS1P3-201ENST00000457048 203 ntBASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSX2IPQ9Y2D8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 AP002469.2-201ENST00000531724 424 ntBASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 AC064862.7-201ENST00000604520 867 ntBASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX2IPQ9Y2D8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 MIR149-201ENST00000384879 89 ntBASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 SAPCD2P3-201ENST00000455031 850 ntBASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 AC113404.2-201ENST00000507884 177 ntBASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 AC026471.1-201ENST00000564629 3026 ntBASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX2IPQ9Y2D8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.48■□□□□ 0.71
SSX2IPQ9Y2D8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms