Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 AC005332.3-201ENST00000589904 676 ntBASIC20.86■□□□□ 0.93
DDX41Q9UJV9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DDX41Q9UJV9 Z83836.1-201ENST00000624605 1642 ntBASIC20.86■□□□□ 0.93
DDX41Q9UJV9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 MTMR9LP-203ENST00000426597 1545 ntBASIC20.85■□□□□ 0.93
DDX41Q9UJV9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.85■□□□□ 0.93
DDX41Q9UJV9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 AC067852.2-201ENST00000590513 2313 ntBASIC20.84■□□□□ 0.93
DDX41Q9UJV9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 KRT18P1-202ENST00000452408 1331 ntBASIC20.84■□□□□ 0.93
DDX41Q9UJV9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 AP003733.1-201ENST00000491725 852 ntBASIC20.84■□□□□ 0.93
DDX41Q9UJV9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 KRT8P50-201ENST00000562022 1438 ntBASIC20.84■□□□□ 0.93
DDX41Q9UJV9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX41Q9UJV9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms