Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 KRT18P23-201ENST00000435622 1283 ntBASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 AP003041.3-201ENST00000527151 707 ntBASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SALL4Q9UJQ4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 AC022211.2-201ENST00000585075 2527 ntBASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 AC100803.2-201ENST00000562459 1963 ntBASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 AL355312.1-201ENST00000407115 2176 ntBASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SALL4Q9UJQ4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 AC145285.6-201ENST00000604632 637 ntBASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.28■□□□□ 0.68
SALL4Q9UJQ4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 WWOX-216ENST00000569818 525 ntBASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 AP005242.2-201ENST00000580065 1175 ntBASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SALL4Q9UJQ4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.27■□□□□ 0.67
SALL4Q9UJQ4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
SALL4Q9UJQ4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SALL4Q9UJQ4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
SALL4Q9UJQ4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SALL4Q9UJQ4 AC132938.6-201ENST00000623828 1655 ntBASIC19.27■□□□□ 0.67
SALL4Q9UJQ4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.27■□□□□ 0.67
SALL4Q9UJQ4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL4Q9UJQ4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL4Q9UJQ4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL4Q9UJQ4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SALL4Q9UJQ4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SALL4Q9UJQ4 AL353719.1-201ENST00000566847 864 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms