Protein–RNA interactions for Protein: Q9UBB5

MBD2, Methyl-CpG-binding domain protein 2, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2Q9UBB5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 AL031432.3-201ENST00000607698 485 ntBASIC15.22■□□□□ 0.03
MBD2Q9UBB5 AL589743.5-201ENST00000616611 1050 ntBASIC15.22■□□□□ 0.03
MBD2Q9UBB5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.22■□□□□ 0.03
MBD2Q9UBB5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.21■□□□□ 0.03
MBD2Q9UBB5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 AC008406.3-201ENST00000620001 1374 ntBASIC15.21■□□□□ 0.02
MBD2Q9UBB5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MBD2Q9UBB5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 UBALD1-205ENST00000590891 2641 ntBASIC15.2■□□□□ 0.02
MBD2Q9UBB5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 NORAD-201ENST00000565493 5339 ntBASIC15.2■□□□□ 0.02
MBD2Q9UBB5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.2■□□□□ 0.02
MBD2Q9UBB5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 YBX1P10-201ENST00000444752 975 ntBASIC15.2■□□□□ 0.02
MBD2Q9UBB5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 AC008556.1-201ENST00000610908 2040 ntBASIC15.2■□□□□ 0.02
MBD2Q9UBB5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 AL121761.2-201ENST00000598007 1648 ntBASIC15.2■□□□□ 0.02
MBD2Q9UBB5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 LINC00602-201ENST00000629776 2065 ntBASIC15.2■□□□□ 0.02
MBD2Q9UBB5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MBD2Q9UBB5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms