Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD1Q9NXG2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
THUMPD1Q9NXG2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD1Q9NXG2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD1Q9NXG2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THUMPD1Q9NXG2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 FITM1-202ENST00000559294 800 ntBASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 Z99916.2-201ENST00000604037 246 ntBASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 CR769767.2-201ENST00000622735 460 ntBASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 AC010653.2-201ENST00000623505 997 ntBASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
THUMPD1Q9NXG2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 SIRPAP1-201ENST00000448467 1770 ntBASIC17.08■□□□□ 0.33
THUMPD1Q9NXG2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 AC104390.1-201ENST00000555663 520 ntBASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 AC112497.1-201ENST00000624824 639 ntBASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 AC012317.2-201ENST00000623305 2251 ntBASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THUMPD1Q9NXG2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 AC008687.5-201ENST00000593746 558 ntBASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms