Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CR769767.2-201ENST00000622735 460 ntBASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CROCCP2-202ENST00000412962 2773 ntBASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
MKS1Q9NXB0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 AC124067.4-201ENST00000519691 2379 ntBASIC17.91■□□□□ 0.46
MKS1Q9NXB0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.91■□□□□ 0.46
MKS1Q9NXB0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 HLA-J-201ENST00000462773 1622 ntBASIC17.91■□□□□ 0.46
MKS1Q9NXB0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 AP005242.2-201ENST00000580065 1175 ntBASIC17.91■□□□□ 0.46
MKS1Q9NXB0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MKS1Q9NXB0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 AL023803.3-201ENST00000615559 522 ntBASIC17.9■□□□□ 0.46
MKS1Q9NXB0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MKS1Q9NXB0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms