Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 AL096828.2-201ENST00000567259 1965 ntBASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PRDM9Q9NQV7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PRDM9Q9NQV7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRDM9Q9NQV7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 AC011498.5-201ENST00000592027 486 ntBASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRDM9Q9NQV7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 AC138028.4-201ENST00000564984 1845 ntBASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms