Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 BCL2-203ENST00000589955 5011 ntBASIC17.71■□□□□ 0.43
EBF4Q9BQW3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 KSR1P1-201ENST00000446298 240 ntBASIC17.71■□□□□ 0.43
EBF4Q9BQW3 AC011506.1-201ENST00000474329 610 ntBASIC17.71■□□□□ 0.43
EBF4Q9BQW3 AP002982.1-201ENST00000492365 877 ntBASIC17.71■□□□□ 0.43
EBF4Q9BQW3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 LINC01126-201ENST00000623515 1646 ntBASIC17.71■□□□□ 0.43
EBF4Q9BQW3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 CROCCP2-202ENST00000412962 2773 ntBASIC17.71■□□□□ 0.43
EBF4Q9BQW3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EBF4Q9BQW3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
EBF4Q9BQW3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
EBF4Q9BQW3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.71■□□□□ 0.42
EBF4Q9BQW3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.71■□□□□ 0.42
EBF4Q9BQW3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 AC026366.1-201ENST00000488803 879 ntBASIC17.7■□□□□ 0.42
EBF4Q9BQW3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 AC104771.1-201ENST00000603335 964 ntBASIC17.7■□□□□ 0.42
EBF4Q9BQW3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EBF4Q9BQW3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 AC133681.1-201ENST00000465482 601 ntBASIC17.69■□□□□ 0.42
EBF4Q9BQW3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 AC110285.5-201ENST00000611501 352 ntBASIC17.69■□□□□ 0.42
EBF4Q9BQW3 CR392000.1-201ENST00000624770 1228 ntBASIC17.69■□□□□ 0.42
EBF4Q9BQW3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 KRT16P1-201ENST00000399124 1418 ntBASIC17.69■□□□□ 0.42
EBF4Q9BQW3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
EBF4Q9BQW3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms