Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 AL031133.1-201ENST00000406807 723 ntBASIC16.04■□□□□ 0.16
VRK1Q99986 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.04■□□□□ 0.16
VRK1Q99986 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 NEK4P2-201ENST00000580004 1012 ntBASIC16.04■□□□□ 0.16
VRK1Q99986 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
VRK1Q99986 CR769767.2-201ENST00000622735 460 ntBASIC16.04■□□□□ 0.16
VRK1Q99986 AL358472.4-201ENST00000633140 710 ntBASIC16.04■□□□□ 0.16
VRK1Q99986 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 GPAT2P1-201ENST00000444924 1672 ntBASIC16.04■□□□□ 0.16
VRK1Q99986 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK1Q99986 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VRK1Q99986 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.04■□□□□ 0.16
VRK1Q99986 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
VRK1Q99986 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.03■□□□□ 0.16
VRK1Q99986 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.03■□□□□ 0.16
VRK1Q99986 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VRK1Q99986 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VRK1Q99986 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 AL671277.2-201ENST00000458060 996 ntBASIC16.03■□□□□ 0.16
VRK1Q99986 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.03■□□□□ 0.16
VRK1Q99986 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
VRK1Q99986 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.03■□□□□ 0.16
VRK1Q99986 AC091076.1-201ENST00000610741 619 ntBASIC16.03■□□□□ 0.16
VRK1Q99986 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
VRK1Q99986 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.03■□□□□ 0.16
VRK1Q99986 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.03■□□□□ 0.16
VRK1Q99986 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VRK1Q99986 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VRK1Q99986 AC099398.1-201ENST00000567919 2776 ntBASIC16.03■□□□□ 0.16
VRK1Q99986 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
VRK1Q99986 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VRK1Q99986 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.02■□□□□ 0.16
VRK1Q99986 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VRK1Q99986 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.02■□□□□ 0.16
VRK1Q99986 MCCD1P1-208ENST00000445732 328 ntBASIC16.02■□□□□ 0.16
VRK1Q99986 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.02■□□□□ 0.16
VRK1Q99986 GCSHP2-201ENST00000560971 527 ntBASIC16.02■□□□□ 0.16
VRK1Q99986 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.02■□□□□ 0.16
VRK1Q99986 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.02■□□□□ 0.16
VRK1Q99986 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.02■□□□□ 0.16
VRK1Q99986 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK1Q99986 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VRK1Q99986 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK1Q99986 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
VRK1Q99986 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
VRK1Q99986 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
VRK1Q99986 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VRK1Q99986 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VRK1Q99986 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VRK1Q99986 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VRK1Q99986 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
VRK1Q99986 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.02■□□□□ 0.15
VRK1Q99986 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.02■□□□□ 0.15
VRK1Q99986 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms