Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 Z83836.1-201ENST00000624605 1642 ntBASIC15.09■□□□□ 0.01
GAFA1Q96PS6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GAFA1Q96PS6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GAFA1Q96PS6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
GAFA1Q96PS6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.08■□□□□ 0
GAFA1Q96PS6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.08■□□□□ 0
GAFA1Q96PS6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.08■□□□□ 0
GAFA1Q96PS6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.08■□□□□ 0
GAFA1Q96PS6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.08■□□□□ 0
GAFA1Q96PS6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.08■□□□□ 0
GAFA1Q96PS6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.08■□□□□ 0
GAFA1Q96PS6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
GAFA1Q96PS6 AL353692.3-201ENST00000407031 1396 ntBASIC15.08■□□□□ 0
GAFA1Q96PS6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GAFA1Q96PS6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
GAFA1Q96PS6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GAFA1Q96PS6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
GAFA1Q96PS6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
GAFA1Q96PS6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.07■□□□□ 0
GAFA1Q96PS6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.07■□□□□ 0
GAFA1Q96PS6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.07■□□□□ 0
GAFA1Q96PS6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.07■□□□□ 0
GAFA1Q96PS6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.07■□□□□ 0
GAFA1Q96PS6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
GAFA1Q96PS6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms