Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 AC092910.1-201ENST00000482027 1129 ntBASIC15.35■□□□□ 0.05
SPG11Q96JI7 SPCS2P1-201ENST00000561636 679 ntBASIC15.35■□□□□ 0.05
SPG11Q96JI7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 HEIH-201ENST00000623091 1652 ntBASIC15.35■□□□□ 0.05
SPG11Q96JI7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 KRT18P27-201ENST00000427733 1299 ntBASIC15.35■□□□□ 0.05
SPG11Q96JI7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 AC009154.2-201ENST00000621177 724 ntBASIC15.35■□□□□ 0.05
SPG11Q96JI7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 AC108751.1-201ENST00000490852 363 ntBASIC15.34■□□□□ 0.05
SPG11Q96JI7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 LINC00602-201ENST00000629776 2065 ntBASIC15.34■□□□□ 0.05
SPG11Q96JI7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 AL645939.2-201ENST00000427340 991 ntBASIC15.34■□□□□ 0.05
SPG11Q96JI7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 AC092865.6-201ENST00000642101 219 ntBASIC15.34■□□□□ 0.05
SPG11Q96JI7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPG11Q96JI7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.34■□□□□ 0.05
SPG11Q96JI7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPG11Q96JI7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SPG11Q96JI7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPG11Q96JI7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPG11Q96JI7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 MIR1199-201ENST00000621445 119 ntBASIC15.33■□□□□ 0.04
SPG11Q96JI7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 SNHG9-202ENST00000564014 471 ntBASIC15.33■□□□□ 0.04
SPG11Q96JI7 AC018845.2-201ENST00000568326 409 ntBASIC15.33■□□□□ 0.04
SPG11Q96JI7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPG11Q96JI7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.33■□□□□ 0.04
SPG11Q96JI7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPG11Q96JI7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms