Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MIR3687-1-201ENST00000614492 61 ntBASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 AC008735.5-201ENST00000623544 497 ntBASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.29■□□□□ 0.2
SNRNP40Q96DI7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 YBX2P1-201ENST00000394192 760 ntBASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 HMGN1P19-201ENST00000436976 333 ntBASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC112482.1-201ENST00000492080 688 ntBASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC040169.1-201ENST00000565382 521 ntBASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AP001160.2-201ENST00000596071 487 ntBASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 AL139288.1-201ENST00000623748 933 ntBASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 MYLKP1-201ENST00000509077 1580 ntBASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SNRNP40Q96DI7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 PMS2P2-201ENST00000425039 1128 ntBASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 AC105339.3-201ENST00000560043 636 ntBASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 MTDHP4-201ENST00000600287 670 ntBASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.27■□□□□ 0.2
SNRNP40Q96DI7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNRNP40Q96DI7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 DNAJB3-201ENST00000446806 729 ntBASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 NKAPP1-205ENST00000585790 367 ntBASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 AL355385.1-201ENST00000606123 409 ntBASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 AC083906.6-201ENST00000641366 219 ntBASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 AC079781.4-201ENST00000641908 219 ntBASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNRNP40Q96DI7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms