Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 FAM8A6P-201ENST00000407496 1135 ntBASIC17.47■□□□□ 0.39
UBE2E3Q969T4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.47■□□□□ 0.39
UBE2E3Q969T4 YBX1P2-201ENST00000489612 999 ntBASIC17.47■□□□□ 0.39
UBE2E3Q969T4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 AL441883.1-201ENST00000566170 1045 ntBASIC17.47■□□□□ 0.39
UBE2E3Q969T4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 AC139887.4-201ENST00000607877 719 ntBASIC17.47■□□□□ 0.39
UBE2E3Q969T4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 AC011558.1-201ENST00000623459 338 ntBASIC17.47■□□□□ 0.39
UBE2E3Q969T4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 KRT89P-201ENST00000620027 1478 ntBASIC17.46■□□□□ 0.39
UBE2E3Q969T4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 HOMER2P1-201ENST00000455653 964 ntBASIC17.46■□□□□ 0.39
UBE2E3Q969T4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2E3Q969T4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2E3Q969T4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2E3Q969T4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2E3Q969T4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2E3Q969T4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2E3Q969T4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 RNF152P1-201ENST00000397754 604 ntBASIC17.45■□□□□ 0.38
UBE2E3Q969T4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 AC113404.2-201ENST00000507884 177 ntBASIC17.45■□□□□ 0.38
UBE2E3Q969T4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 AC024563.2-201ENST00000603282 481 ntBASIC17.45■□□□□ 0.38
UBE2E3Q969T4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 AC007613.1-201ENST00000572811 2597 ntBASIC17.45■□□□□ 0.38
UBE2E3Q969T4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2E3Q969T4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2E3Q969T4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2E3Q969T4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms