Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.32■□□□□ 0.04
RTN4IP1Q8WWV3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 UNC93B2-201ENST00000285383 730 ntBASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 KRT17P2-201ENST00000300992 1314 ntBASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTN4IP1Q8WWV3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTN4IP1Q8WWV3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 AC009053.2-201ENST00000563701 2365 ntBASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.29■□□□□ 0.04
RTN4IP1Q8WWV3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms