Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
U2AF1L4Q8WU68 TEX21P-204ENST00000641479 1693 ntBASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 AC112482.1-201ENST00000492080 688 ntBASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 MIR3687-2-201ENST00000577708 61 ntBASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 MIR3687-1-201ENST00000614492 61 ntBASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.73■□□□□ 0.91
U2AF1L4Q8WU68 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 AL591424.1-201ENST00000442569 1213 ntBASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 MTDHP3-201ENST00000594186 672 ntBASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 AL161938.1-201ENST00000569833 2180 ntBASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 AL512353.2-201ENST00000448759 1962 ntBASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2AF1L4Q8WU68 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 KRT89P-201ENST00000620027 1478 ntBASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 YBX2P1-201ENST00000394192 760 ntBASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 RBM17P3-201ENST00000417687 1192 ntBASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
U2AF1L4Q8WU68 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.7■□□□□ 0.91
U2AF1L4Q8WU68 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 AL049812.1-201ENST00000432563 2267 ntBASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 AC034105.1-201ENST00000563488 319 ntBASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2AF1L4Q8WU68 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms