Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 AKR1C7P-201ENST00000305623 895 ntBASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 POM121L3P-201ENST00000419331 1163 ntBASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3RF2Q8TEC5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 LINC00602-201ENST00000629776 2065 ntBASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 AC068472.1-201ENST00000474589 881 ntBASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 AC096582.2-201ENST00000510860 516 ntBASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 AL121912.1-201ENST00000603683 238 ntBASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 AC009113.1-201ENST00000570267 2443 ntBASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3RF2Q8TEC5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 AP002469.2-201ENST00000531724 424 ntBASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3RF2Q8TEC5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 SAPCD2P3-201ENST00000455031 850 ntBASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.77■□□□□ 0.6
SH3RF2Q8TEC5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms